PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0293s0001.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family ERF
Protein Properties Length: 241aa    MW: 27280.7 Da    PI: 6.2926
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0293s0001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.78.2e-203685255
                  AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                          ykGVr++  +g+WvAeIrdp   gkr r++lg+f t+eeAa+a+++ +++++g
  Mapoly0293s0001.1.p 36 EYKGVRQRT-WGKWVAEIRDP---GKRSRVWLGTFNTKEEAAAAYDRKALQFFG 85
                         69****999.**********9...557**********************99887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.62E-283595No hitNo description
PROSITE profilePS5103221.2063693IPR001471AP2/ERF domain
PfamPF008473.2E-133683IPR001471AP2/ERF domain
SuperFamilySSF541714.18E-213693IPR016177DNA-binding domain
SMARTSM003803.1E-303699IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-283694IPR001471AP2/ERF domain
PRINTSPR003673.5E-103748IPR001471AP2/ERF domain
PRINTSPR003673.5E-105975IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MCRMNKRLGK GETGLPKKWS KASSRGKGGP ENFSCEYKGV RQRTWGKWVA EIRDPGKRSR  60
VWLGTFNTKE EAAAAYDRKA LQFFGPNAHF NLQSSQLAPK SNQNAVFTPL FSVPPRTLFS  120
RTDPYPQVSE AYEIPPQPLK VETNLCENFE ALYTGSNDAS LLQEPFINFP DKDIEELPPL  180
HTHSVIDETQ DFFIPLQVKG LKKNEELPAL DVDCENLDKQ PDFDFASYLN EIAFKYDGPR  240
*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-163792359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A6e-163792662ATERF1
3gcc_A6e-163792662ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.14e-32ERF family protein